KEEP Embedding Framework Implementation#1125
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shreyaaishi wants to merge 16 commits intosunlabuiuc:masterfrom
Open
KEEP Embedding Framework Implementation#1125shreyaaishi wants to merge 16 commits intosunlabuiuc:masterfrom
shreyaaishi wants to merge 16 commits intosunlabuiuc:masterfrom
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…feature/keep-impl Merge tests into keep-impl branch
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Contributors: Shreya Basu(shreyab4), Ty Roney(tjroney2), Rohan Vasavada(rdv2)
Contribution Type: New Model
Description: Implemented KEEP Embedding Framework, intended to be used with a combination of the following OMOP tables: condition_occurrence, procedure_occurrence, drug_exposure, measurement
Original Paper - KEEP: Integrating Medical Ontologies with Clinical Data for Robust Code Embeddings
Files to Review:
pyhealth/models/keep_embedding.py- Main model implementationexamples/keep.ipynb- Example usagetests/core/test_keep_embedding.py- Test casesdocs/api/models/pyhealth.models.KeepEmbedding- Documentation