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@statgen

Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

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  1. pheweb pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python 198 75

  2. locuszoom locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    JavaScript 170 33

  3. demuxlet demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    C++ 138 25

  4. bamUtil bamUtil Public

    C++ 98 30

  5. SLURM-examples SLURM-examples Public

    Python 96 27

  6. Minimac4 Minimac4 Public

    C++ 86 26

Repositories

Showing 10 of 122 repositories
  • bravo_data_prep Public

    Work flows and tools to create data that backs the BRAVO API.

    statgen/bravo_data_prep's past year of commit activity
    C++ 0 MIT 2 8 0 Updated Oct 14, 2026
  • fipip_manuscript Public

    Manuscript source files to reproduce fiPIP manuscript display items

    statgen/fipip_manuscript's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 14, 2026
  • cloudgene3 Public Forked from genepi/cloudgene3

    A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.

    statgen/cloudgene3's past year of commit activity
    Java 0 MIT 9 0 0 Updated Oct 13, 2026
  • encore Public

    Encore Analysis Server

    statgen/encore's past year of commit activity
    Python 13 AGPL-3.0 6 0 4 Updated Oct 1, 2026
  • ansible-bravo-deploy Public

    Anisble deployment roles and playbook for BRAVO API and UI

    statgen/ansible-bravo-deploy's past year of commit activity
    Jinja 0 1 1 0 Updated Sep 28, 2026
  • bravo_vue Public

    BRAVO's Vue JS based UI.

    statgen/bravo_vue's past year of commit activity
    Vue 0 0 13 19 Updated Sep 28, 2026
  • imputationserver2 Public Forked from genepi/imputationserver2

    Imputation Server 2 workflow to facilitate genotype imputation at scale.

    statgen/imputationserver2's past year of commit activity
    Nextflow 0 MIT 15 0 0 Updated Sep 23, 2026
  • topmed_chip_calling Public

    Workflow and tooling for TOPMed CHIP calling

    statgen/topmed_chip_calling's past year of commit activity
    C++ 0 MPL-2.0 0 0 0 Updated Sep 23, 2026
  • bravo_api Public

    Server side data processing and retrieval endpoints for BRAVO

    statgen/bravo_api's past year of commit activity
    Python 1 MIT 2 16 0 Updated Sep 17, 2026
  • imputationserver-utils Public Forked from genepi/imputationserver-utils
    statgen/imputationserver-utils's past year of commit activity
    Java 0 MIT 4 0 0 Updated Sep 17, 2026
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