Skip to content
@seqan

SeqAn

SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data.

Pinned Loading

  1. seqan3 seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    C++ 448 87

  2. seqan seqan Public

    SeqAn's official repository.

    C++ 500 173

Repositories

Showing 10 of 51 repositories
  • chopper Public

    A tool for partitioning a set of sequences into similar batches.

    seqan/chopper’s past year of commit activity
    C++ 9 BSD-3-Clause 9 6 3 Updated Mar 28, 2026
  • raptor Public

    A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

    seqan/raptor’s past year of commit activity
    C++ 53 17 11 5 Updated Mar 28, 2026
  • app-template Public template

    This template comes pre-configured with various SeqAn libraries and a basic Continuous Integration setup. It is designed to provide a robust starting point for your projects, while offering the flexibility to customize and adapt to your specific requirements.

    seqan/app-template’s past year of commit activity
    CMake 6 9 20 0 Updated Mar 28, 2026
  • needle Public

    A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences

    seqan/needle’s past year of commit activity
    C++ 14 9 7 3 Updated Mar 28, 2026
  • FPGAlign Public
    seqan/FPGAlign’s past year of commit activity
    C++ 0 1 0 2 Updated Mar 28, 2026
  • sharg-parser Public

    The modern argument parser for c++ tools

    seqan/sharg-parser’s past year of commit activity
    C++ 11 8 12 4 Updated Mar 28, 2026
  • dream-stellar Public

    Fast and exact local alignments

    seqan/dream-stellar’s past year of commit activity
    C++ 3 BSD-3-Clause 3 5 6 Updated Mar 23, 2026
  • actions Public
    seqan/actions’s past year of commit activity
    Shell 0 CC-BY-4.0 3 0 0 Updated Mar 23, 2026
  • seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    seqan/seqan3’s past year of commit activity
    C++ 448 87 30 2 Updated Mar 23, 2026
  • hibf Public

    HIBF and IBF

    seqan/hibf’s past year of commit activity
    C++ 4 3 6 6 Updated Mar 23, 2026
View all repositories

Top languages

Loading…

Most used topics

Loading…