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new module: macsyfinder

new moduleAdding a new moduleAdding a new module

Status: Open.

#10073 In nf-core/modules;

· brovolia opened on Feb 17, 2026

new module: gatk4/analyzecovariates

new moduleAdding a new moduleAdding a new module

Status: Open.

#10054 In nf-core/modules;

· thomasisensee opened on Feb 16, 2026

new module: pharmcat/pharmcatpipeline

new moduleAdding a new moduleAdding a new module

Status: Open.

#10051 In nf-core/modules;

· ramsainanduri opened on Feb 16, 2026

new module: pharmcat/pharmcat

new moduleAdding a new moduleAdding a new module

Status: Open.

#10050 In nf-core/modules;

· ramsainanduri opened on Feb 16, 2026

new subworkflow: tif_registration_stainwarpy

imaging

new subworkflow

Status: Open.

#10033 In nf-core/modules;

· tckumarasekara opened on Feb 15, 2026

new module: guacamole

new moduleAdding a new moduleAdding a new module

Status: Open.

#10026 In nf-core/modules;

· Laurenz0908 opened on Feb 13, 2026

Migration to topic channels: abacas

Status: Open.

#10009 In nf-core/modules;

· atrigila opened on Feb 12, 2026

new module: VARIANT-EXTRACTOR

new moduleAdding a new moduleAdding a new module

Status: Open.

#9996 In nf-core/modules;

· georgiakes opened on Feb 12, 2026

new module: seqkit/sample

new moduleAdding a new moduleAdding a new module

wishlistclosed after a year if no one assignedclosed after a year if no one assigned

Status: Open.

#9984 In nf-core/modules;

· bounlu opened on Feb 12, 2026

Adopt topic channels in all nf-core modules

good first issueGood for newcomersGood for newcomers

Status: Open.

Enhancement

#9978 In nf-core/modules;

· atrigila opened on Feb 11, 2026

·  

Adopt topic channels in all nf-core modules

new module: telescope/assign

new moduleAdding a new moduleAdding a new module

Status: Open.

#9942 In nf-core/modules;

· hanalysis opened on Feb 9, 2026

bam_tumor_only_somatic_variant_calling_gatk: Input channel structure mismatch for ch_fai between MUTECT2 and GETPILEUPSUMMARIES

bugSomething isn't workingSomething isn't working

Status: Open.

#9891 In nf-core/modules;

· KhoiDang410 opened on Feb 4, 2026