I have installed the python-drmaa bindings for LSF DRMAA 1.1.1 and when I try to import the package, it fails with the following error message:
[sfux@eu-login-01 ~]$ module load new gcc/4.8.2 python/2.7.12 lsf_drmaa/1.1.1
Autoloading openblas/0.2.13_seq
[sfux@eu-login-01 ~]$ python
Python 2.7.12 (default, Nov 2 2016, 13:46:00)
[GCC 4.8.2] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import drmaa
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/cluster/apps/python/2.7.12/x86_64/lib64/python2.7/site-packages/drmaa/__init__.py", line 65, in <module>
from .session import JobInfo, JobTemplate, Session
File "/cluster/apps/python/2.7.12/x86_64/lib64/python2.7/site-packages/drmaa/session.py", line 39, in <module>
from drmaa.helpers import (adapt_rusage, Attribute, attribute_names_iterator,
File "/cluster/apps/python/2.7.12/x86_64/lib64/python2.7/site-packages/drmaa/helpers.py", line 36, in <module>
from drmaa.wrappers import (drmaa_attr_names_t, drmaa_attr_values_t,
File "/cluster/apps/python/2.7.12/x86_64/lib64/python2.7/site-packages/drmaa/wrappers.py", line 56, in <module>
_lib = CDLL(libpath, mode=RTLD_GLOBAL)
File "/cluster/apps/python/2.7.12/x86_64/lib64/python2.7/ctypes/__init__.py", line 362, in __init__
self._handle = _dlopen(self._name, mode)
OSError: /cluster/apps/lsf/10.1/linux2.6-glibc2.3-x86_64/lib/liblsf.so: undefined symbol: shm_open
>>>
I have installed the python-drmaa bindings for LSF DRMAA 1.1.1 and when I try to import the package, it fails with the following error message:
Is this a known problem ? And can you provide any help with this issue ?