ezmsg-learn/pyproject.toml at dev · ezmsg-org/ezmsg-learn · GitHub

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[project]
name = "ezmsg-learn"
description = "ezmsg namespace package for machine learning"
readme = "README.md"
authors = [
    { name = "Chadwick Boulay", email = "chadwick.boulay@gmail.com" }
]
license = "MIT"
requires-python = ">=3.10"
dynamic = ["version"]
dependencies = [
    # 3.10.0b2 for CoordinateAxis.fingerprint and AxisArray.chunk_dim, which
    # ezmsg-baseproc's default state hash reads. Pinned directly rather than
    # left to the transitive requirement: uv only enables pre-releases for a
    # package named with a pre-release marker in *this* file.
    "ezmsg>=3.10.0b2",
    "ezmsg-baseproc>=1.12.0",
    "ezmsg-sigproc>=3.0.0",
    "numpy",
    "scipy",
    "array-api-compat",
]

[project.optional-dependencies]
# The heavyweight backends are opt-in so that the pure-numpy processors
# (process.ssr, process.flatten, process.refit_kalman, ...) can be installed on
# constrained hosts without pulling in a full PyTorch/sklearn stack.
sklearn = [
    "pandas>=2.2",
    "river>=0.22.0",
    "scikit-learn>=1.6.0",
]
torch = [
    "torch>=2.6.0",
]
all = [
    "ezmsg-learn[sklearn,torch]",
]

[dependency-groups]
dev = [
  {include-group = "lint"},
  {include-group = "test"},
  "pre-commit>=4.3.0",
]
lint = [
    "ruff==0.16.2",
]
test = [
    # The backends are extras, so `uv sync` would not install them; the test
    # suite covers all of them.
    "ezmsg-learn[all]",
    "ezmsg-simbiophys>=1.8.0",
    "hmmlearn>=0.3.3",
    "pytest>=8.4.1",
]
docs = [
    # autodoc imports every documented module, so the docs build needs the
    # project and all of its backends -- not just Sphinx.
    "ezmsg-learn[all]",
    "sphinx>=8.1.3",
    "pydata-sphinx-theme",
    "sphinx_autodoc_typehints>=3.0.0",
    "sphinx_copybutton",
]

[build-system]
requires = ["hatchling", "hatch-vcs"]
build-backend = "hatchling.build"

[tool.hatch.version]
source = "vcs"

[tool.hatch.build.hooks.vcs]
version-file = "src/ezmsg/learn/__version__.py"

[tool.hatch.build.targets.wheel]
packages = ["src/ezmsg"]

[tool.pytest.ini_options]
asyncio_mode = "auto"
asyncio_default_fixture_loop_scope = "function"
pythonpath = [
    "src",
    ".",
]

[tool.ruff]
line-length = 120
target-version = "py310"
# Exclude auto-generated files
exclude = ["*/__version__.py"]

[tool.ruff.lint]
select = ["E", "F", "I", "W"]

[tool.ruff.lint.isort]
known-first-party = ["ezmsg.learn"]
known-third-party = ["ezmsg", "ezmsg.baseproc", "ezmsg.sigproc"]

[tool.uv.sources]
# Uncomment to use development version of ezmsg from git
#ezmsg = { git = "https://github.com/ezmsg-org/ezmsg.git", branch = "feature/profiling" }